Index

A

add_points() (pytom3d.core.Topography method)

B

basic_contour() (pytom3d.viewer.PostViewer method)

C

cardinality() (pytom3d.core.Topography method) cbar_bounds() (in module pytom3d.viewer) centroid() (pytom3d.core.Topography method) cfg_matplotlib() (in module pytom3d.viewer) config() (pytom3d.viewer.PostViewer method) (pytom3d.viewer.Viewer method) config_3d() (pytom3d.viewer.Viewer method)

config_canvas() (pytom3d.viewer.PostViewer method) config_colourbar() (pytom3d.viewer.PostViewer method) config_scan_view() (pytom3d.viewer.PostViewer method) contour() (pytom3d.viewer.PostViewer method) (pytom3d.viewer.Viewer method) contour_and_scan_2() (pytom3d.viewer.PostViewer method) contour_data_wrapper() (in module pytom3d.util) cut() (pytom3d.core.Topography method)

D

discrete_colorbar() (in module pytom3d.viewer)

E

edges() (pytom3d.core.Topography method)

export() (pytom3d.core.Topography method) export_regressor() (in module pytom3d.util)

F

filter_points() (pytom3d.core.Topography method)

fit() (pytom3d.core.Topography method) flip() (pytom3d.core.Topography method)

G

gather_data() (in module pytom3d.util)

get_coordinates() (in module pytom3d.util) get_topography() (pytom3d.core.Topography method)

H

history() (pytom3d.core.Topography method)

I

import_regressor() (in module pytom3d.util)

L

list_files() (in module pytom3d.util)

lite_dict() (in module pytom3d.util) load() (in module pytom3d.util)

M

make_grid() (pytom3d.core.Topography method) module pytom3d pytom3d.core pytom3d.util pytom3d.viewer

P

pick_points() (pytom3d.core.Topography method) pick_scans() (pytom3d.core.Topography method) PostViewer (class in pytom3d.viewer) pred() (pytom3d.core.Topography method) predict_at_node() (in module pytom3d.util) prediction_wrapper() (in module pytom3d.util) printer() (in module pytom3d.util)

pytom3d module pytom3d.core module pytom3d.util module pytom3d.viewer module

R

read() (pytom3d.core.Topography method) recursive_search() (in module pytom3d.util)

rotate() (pytom3d.core.Topography method) rotate_about_centre() (pytom3d.core.Topography method) rotate_by_svd() (pytom3d.core.Topography method)

S

save() (in module pytom3d.util) scan_compare() (pytom3d.viewer.PostViewer method) scan_data_wrapper() (in module pytom3d.util) scan_view() (pytom3d.viewer.PostViewer method) scan_view_and_bar() (pytom3d.viewer.PostViewer method)

scan_view_and_fill() (pytom3d.viewer.PostViewer method) scatter3D() (pytom3d.viewer.Viewer method) scatter3DRegression() (pytom3d.viewer.Viewer method) scatter3DRegressorUnc() (pytom3d.viewer.Viewer method) set_limits() (pytom3d.viewer.Viewer method) svd() (pytom3d.core.Topography method)

T

Topography (class in pytom3d.core)

translate() (pytom3d.core.Topography method) trials() (in module pytom3d.util)

U

update() (in module pytom3d.util)

V

Viewer (class in pytom3d.viewer)

views2D() (pytom3d.viewer.Viewer method)